node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM53279.1 | rpsF | SAMN05660299_01067 | SAMN05660299_02358 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.449 |
SDM53279.1 | rpsL | SAMN05660299_01067 | SAMN05660299_02026 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.684 |
SDM53279.1 | rpsM | SAMN05660299_01067 | SAMN05660299_01737 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.500 |
SDM53279.1 | rsgA | SAMN05660299_01067 | SAMN05660299_01399 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.717 |
SDM71047.1 | SDM71122.1 | SAMN05660299_01398 | SAMN05660299_01400 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Serine/threonine protein kinase. | 0.843 |
SDM71047.1 | SDM71160.1 | SAMN05660299_01398 | SAMN05660299_01401 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Protein phosphatase. | 0.713 |
SDM71047.1 | rsgA | SAMN05660299_01398 | SAMN05660299_01399 | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.929 |
SDM71122.1 | SDM71047.1 | SAMN05660299_01400 | SAMN05660299_01398 | Serine/threonine protein kinase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.843 |
SDM71122.1 | SDM71160.1 | SAMN05660299_01400 | SAMN05660299_01401 | Serine/threonine protein kinase. | Protein phosphatase. | 0.992 |
SDM71122.1 | rsgA | SAMN05660299_01400 | SAMN05660299_01399 | Serine/threonine protein kinase. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.941 |
SDM71160.1 | SDM71047.1 | SAMN05660299_01401 | SAMN05660299_01398 | Protein phosphatase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.713 |
SDM71160.1 | SDM71122.1 | SAMN05660299_01401 | SAMN05660299_01400 | Protein phosphatase. | Serine/threonine protein kinase. | 0.992 |
SDM71160.1 | rsgA | SAMN05660299_01401 | SAMN05660299_01399 | Protein phosphatase. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.822 |
rpsF | SDM53279.1 | SAMN05660299_02358 | SAMN05660299_01067 | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.449 |
rpsF | rpsI | SAMN05660299_02358 | SAMN05660299_00875 | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rpsF | rpsL | SAMN05660299_02358 | SAMN05660299_02026 | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
rpsF | rpsM | SAMN05660299_02358 | SAMN05660299_01737 | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.995 |
rpsF | rsgA | SAMN05660299_02358 | SAMN05660299_01399 | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.716 |
rpsI | rpsF | SAMN05660299_00875 | SAMN05660299_02358 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rpsI | rpsL | SAMN05660299_00875 | SAMN05660299_02026 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |