STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM77966.1Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (217 aa)    
Predicted Functional Partners:
SDM77914.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein.
 
 
 0.970
SDM78010.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.954
SDM77866.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein.
 
 
 0.953
SDM78049.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.842
SDM02819.1
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.771
SDM77658.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
  
 0.742
SDM85081.1
CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.601
SDM78090.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.572
SDM77816.1
Capsular exopolysaccharide family.
 
  
 0.528
SDM78140.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.521
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.