STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM82024.1Cd2+/Zn2+-exporting ATPase. (643 aa)    
Predicted Functional Partners:
SDM67117.1
DNA-binding transcriptional regulator, ArsR family.
 
  
 0.738
SDM82059.1
Cupin domain-containing protein.
  
    0.524
SDM82097.1
Carbon-nitrogen hydrolase.
  
  
 0.499
SDM81987.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.481
SDM82138.1
Hypothetical protein.
       0.454
SDM81944.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.443
SDM82173.1
Amidohydrolase; Belongs to the peptidase M20A family.
       0.440
SDN19392.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.437
SDN22311.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.437
SDN30691.1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
  
  
 0.437
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.