STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM97734.1Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase. (333 aa)    
Predicted Functional Partners:
SDM41812.1
Adenosylcobinamide kinase.
 
 
 0.946
SDN41058.1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase.
 
  
 
0.867
cobQ
Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.864
cobS
Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
  
 0.855
SDM82835.1
HD domain-containing protein.
 
 
 0.758
SDM62688.1
cob(I)alamin adenosyltransferase.
 
   
 0.734
SDM41721.1
Alpha-ribazole phosphatase; Belongs to the phosphoglycerate mutase family.
 
 
 0.719
SDM97774.1
Hypothetical protein.
       0.690
SDM45438.1
Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
 
 
 0.620
SDM80880.1
Histidinol-phosphate aminotransferase.
  
  
 0.508
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.