STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN06520.12-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. (323 aa)    
Predicted Functional Partners:
SDN06545.1
2-dehydro-3-deoxygluconokinase.
 
 
 0.982
SDN06588.1
Gluconate 5-dehydrogenase.
 
  
 0.753
SDM97125.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.736
SDM16071.1
Transcriptional regulator, RpiR family.
 
  
 0.714
uxaC
Glucuronate isomerase.
 
   
 0.586
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.567
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.549
SDN49410.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
 0.545
SDM66275.1
Glucose-6-phosphate isomerase.
  
 
 0.540
SDN06491.1
Lysophospholipase L1.
    
  0.517
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.