STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN38914.1Nitrogenase iron protein NifH; Belongs to the NifH/BchL/ChlL family. (256 aa)    
Predicted Functional Partners:
SDN38884.1
Nitrogenase molybdenum-cofactor synthesis protein NifE.
 
 0.987
SDN38854.1
Nitrogenase component 1 type Oxidoreductase.
 
 0.983
SDN38612.1
Nitrogenase component 1 type Oxidoreductase.
 
 0.976
SDN38646.1
Nitrogenase component 1 type Oxidoreductase.
 
 0.968
SDN18725.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
  
  
 0.832
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.741
SDN38943.1
Putative iron-only hydrogenase system regulator.
       0.736
SDN38829.1
Hydrogenase maturation protein, carbamoyltransferase HypF; Belongs to the carbamoyltransferase HypF family.
     
 0.729
SDM73248.1
Glutamine synthetase.
   
 
 0.708
SDM83063.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.705
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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