STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN39514.13-oxoacyl-[acyl-carrier-protein] reductase. (246 aa)    
Predicted Functional Partners:
SDM48938.1
[acyl-carrier-protein] S-malonyltransferase.
 0.848
SDM18485.1
Glutamate synthase (ferredoxin).
     
 0.840
SDN19392.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.832
SDN22311.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.832
SDN30691.1
Pyruvate:ferredoxin oxidoreductase, beta subunit.
   
 0.832
SDN43134.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.832
SDN52176.1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg.
   
 0.832
SDM49098.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.796
SDN32171.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.795
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 0.744
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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