STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN39664.1Uncharacterized membrane protein YadS. (495 aa)    
Predicted Functional Partners:
SDN39900.1
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
     0.654
SDN39717.1
Hypothetical protein.
       0.645
SDN39755.1
Sulfur carrier protein.
 
     0.615
SDN39936.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
   
   0.613
SDN09247.1
Uncharacterized conserved protein, DUF169 family.
  
     0.594
SDN39796.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
       0.566
SDN39853.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
       0.566
SDN39627.1
O-acetylhomoserine (thiol)-lyase.
       0.487
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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