Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM04893.1 | SDM51384.1 | SAMN05660299_00079 | SAMN05660299_01016 | HDIG domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.729 |
SDM04893.1 | SDM53883.1 | SAMN05660299_00079 | SAMN05660299_01085 | HDIG domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.727 |
SDM04893.1 | SDM54709.1 | SAMN05660299_00079 | SAMN05660299_01106 | HDIG domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.750 |
SDM04893.1 | SDM67196.1 | SAMN05660299_00079 | SAMN05660299_01330 | HDIG domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.686 |
SDM04893.1 | SDM78988.1 | SAMN05660299_00079 | SAMN05660299_01546 | HDIG domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.757 |
SDM04893.1 | SDM79039.1 | SAMN05660299_00079 | SAMN05660299_01547 | HDIG domain-containing protein. | EAL domain-containing protein. | 0.703 |
SDM04893.1 | SDM93036.1 | SAMN05660299_00079 | SAMN05660299_01773 | HDIG domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.787 |
SDM04893.1 | SDN28528.1 | SAMN05660299_00079 | SAMN05660299_02459 | HDIG domain-containing protein. | Diguanylate phosphodiesterase. | 0.479 |
SDM04893.1 | SDN49845.1 | SAMN05660299_00079 | SAMN05660299_02807 | HDIG domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.767 |
SDM17675.1 | SDM51384.1 | SAMN05660299_00378 | SAMN05660299_01016 | HD domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.784 |
SDM17675.1 | SDM53883.1 | SAMN05660299_00378 | SAMN05660299_01085 | HD domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.784 |
SDM17675.1 | SDM54709.1 | SAMN05660299_00378 | SAMN05660299_01106 | HD domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.808 |
SDM17675.1 | SDM67196.1 | SAMN05660299_00378 | SAMN05660299_01330 | HD domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.749 |
SDM17675.1 | SDM78988.1 | SAMN05660299_00378 | SAMN05660299_01546 | HD domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.793 |
SDM17675.1 | SDM79039.1 | SAMN05660299_00378 | SAMN05660299_01547 | HD domain-containing protein. | EAL domain-containing protein. | 0.765 |
SDM17675.1 | SDM93036.1 | SAMN05660299_00378 | SAMN05660299_01773 | HD domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.835 |
SDM17675.1 | SDN28528.1 | SAMN05660299_00378 | SAMN05660299_02459 | HD domain-containing protein. | Diguanylate phosphodiesterase. | 0.591 |
SDM17675.1 | SDN49845.1 | SAMN05660299_00378 | SAMN05660299_02807 | HD domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.823 |
SDM51384.1 | SDM04893.1 | SAMN05660299_01016 | SAMN05660299_00079 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | HDIG domain-containing protein. | 0.729 |
SDM51384.1 | SDM17675.1 | SAMN05660299_01016 | SAMN05660299_00378 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | HD domain-containing protein. | 0.784 |
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