STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP71252.1Cysteine desulfurase; PFAM: aminotransferase, class V. (348 aa)    
Predicted Functional Partners:
ABP70157.1
PFAM: nitrogen-fixing NifU domain protein.
 
 0.997
ABP70063.1
NifU-like protein.
  
 0.991
ABP69623.1
PFAM: SirA family protein; Belongs to the sulfur carrier protein TusA family.
   
 0.986
ABP71253.1
TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074.
  
  
 0.967
ABP70155.1
PFAM: NifQ family protein.
  
 0.964
ABP69845.1
PFAM: ferredoxin.
 
 0.926
ABP69250.1
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
 
  
 0.924
ABP70158.1
Aminotransferase, class V; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
  
 
0.916
ABP69033.1
PFAM: Rhodanese domain protein.
   
 0.915
ABP69653.1
PFAM: Rhodanese domain protein.
   
 0.915
Your Current Organism:
Rhodobacter sphaeroides ATCC 17025
NCBI taxonomy Id: 349102
Other names: R. sphaeroides ATCC 17025, Rhodobacter sphaeroides str. ATCC 17025, Rhodobacter sphaeroides strain ATCC 17025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.