STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ93866.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
ABQ95042.1
PFAM: Tetratricopeptide TPR_4.
 
   0.824
ABQ95068.1
Uncharacterized protein-like protein.
  
     0.774
ABQ93834.1
Hypothetical protein.
  
     0.773
ABQ93725.1
PFAM: protein of unknown function DUF218.
  
     0.772
ABQ93738.1
Hypothetical protein.
  
     0.760
ABQ95088.1
Hypothetical protein.
  
     0.755
ABQ94547.1
PFAM: protein of unknown function DUF490.
  
     0.754
ABQ94408.1
PFAM: porin, Gram-negative type.
  
  
 0.752
ABQ93250.1
PFAM: Sporulation domain protein.
  
     0.749
ABQ94818.1
Uncharacterized protein-like protein; Belongs to the UPF0149 family.
  
     0.748
Your Current Organism:
Psychrobacter sp. PRwf1
NCBI taxonomy Id: 349106
Other names: P. sp. PRwf-1, Psychrobacter sp. PRwf-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.