STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ94017.1Hypothetical protein. (363 aa)    
Predicted Functional Partners:
ABQ94137.1
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR.
  
     0.494
ABQ94162.1
Exonuclease V gamma subunit-like protein.
  
     0.490
ABQ94018.1
Hypothetical protein.
       0.470
ABQ94016.1
PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease.
       0.468
ABQ95267.1
TIGRFAM: outer membrane autotransporter barrel domain; PFAM: lipolytic enzyme, G-D-S-L family; Autotransporter beta- domain protein.
  
     0.443
ABQ94794.1
Membrane protein-like protein.
  
     0.420
Your Current Organism:
Psychrobacter sp. PRwf1
NCBI taxonomy Id: 349106
Other names: P. sp. PRwf-1, Psychrobacter sp. PRwf-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.