Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ94782.1 | ABQ94783.1 | PsycPRwf_1842 | PsycPRwf_1843 | Hypothetical protein. | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | 0.488 |
ABQ94783.1 | ABQ94782.1 | PsycPRwf_1843 | PsycPRwf_1842 | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | Hypothetical protein. | 0.488 |
ABQ94783.1 | ABQ94784.1 | PsycPRwf_1843 | PsycPRwf_1844 | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | PFAM: Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.474 |
ABQ94783.1 | atpD | PsycPRwf_1843 | PsycPRwf_0193 | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.469 |
ABQ94783.1 | atpE | PsycPRwf_1843 | PsycPRwf_0188 | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.430 |
ABQ94783.1 | groL | PsycPRwf_1843 | PsycPRwf_0638 | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.462 |
ABQ94784.1 | ABQ94783.1 | PsycPRwf_1844 | PsycPRwf_1843 | PFAM: Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | 0.474 |
atpD | ABQ94783.1 | PsycPRwf_0193 | PsycPRwf_1843 | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | 0.469 |
atpD | atpE | PsycPRwf_0193 | PsycPRwf_0188 | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
atpD | groL | PsycPRwf_0193 | PsycPRwf_0638 | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.533 |
atpE | ABQ94783.1 | PsycPRwf_0188 | PsycPRwf_1843 | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | 0.430 |
atpE | atpD | PsycPRwf_0188 | PsycPRwf_0193 | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.999 |
groL | ABQ94783.1 | PsycPRwf_0638 | PsycPRwf_1843 | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; Belongs to the peptidase M16 family. | 0.462 |
groL | atpD | PsycPRwf_0638 | PsycPRwf_0193 | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.533 |