STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ94830.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
ABQ93588.1
Hypothetical protein.
  
     0.643
ABQ93560.1
PFAM: cytochrome c, class I.
  
     0.591
ABQ93664.1
TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3.
    
   0.525
ABQ93317.1
Cytochrome c5-like protein.
  
     0.470
ABQ94829.1
PFAM: cytochrome c, class I.
 
   
 0.447
ABQ94689.1
Uncharacterized protein-like protein.
  
     0.431
ABQ93248.1
Hypothetical protein.
  
     0.418
ABQ93746.1
PFAM: cytochrome c1.
 
  
 0.414
ABQ93468.1
Hypothetical protein.
  
     0.412
ABQ94392.1
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.411
Your Current Organism:
Psychrobacter sp. PRwf1
NCBI taxonomy Id: 349106
Other names: P. sp. PRwf-1, Psychrobacter sp. PRwf-1
Server load: low (30%) [HD]