Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ93248.1 | ABQ93468.1 | PsycPRwf_0293 | PsycPRwf_0513 | Hypothetical protein. | Hypothetical protein. | 0.490 |
ABQ93248.1 | ABQ93560.1 | PsycPRwf_0293 | PsycPRwf_0605 | Hypothetical protein. | PFAM: cytochrome c, class I. | 0.417 |
ABQ93248.1 | ABQ94689.1 | PsycPRwf_0293 | PsycPRwf_1749 | Hypothetical protein. | Uncharacterized protein-like protein. | 0.764 |
ABQ93248.1 | ABQ94830.1 | PsycPRwf_0293 | PsycPRwf_1890 | Hypothetical protein. | Hypothetical protein. | 0.418 |
ABQ93317.1 | ABQ93664.1 | PsycPRwf_0362 | PsycPRwf_0710 | Cytochrome c5-like protein. | TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3. | 0.525 |
ABQ93317.1 | ABQ93746.1 | PsycPRwf_0362 | PsycPRwf_0794 | Cytochrome c5-like protein. | PFAM: cytochrome c1. | 0.702 |
ABQ93317.1 | ABQ94829.1 | PsycPRwf_0362 | PsycPRwf_1889 | Cytochrome c5-like protein. | PFAM: cytochrome c, class I. | 0.714 |
ABQ93317.1 | ABQ94830.1 | PsycPRwf_0362 | PsycPRwf_1890 | Cytochrome c5-like protein. | Hypothetical protein. | 0.470 |
ABQ93468.1 | ABQ93248.1 | PsycPRwf_0513 | PsycPRwf_0293 | Hypothetical protein. | Hypothetical protein. | 0.490 |
ABQ93468.1 | ABQ94689.1 | PsycPRwf_0513 | PsycPRwf_1749 | Hypothetical protein. | Uncharacterized protein-like protein. | 0.488 |
ABQ93468.1 | ABQ94830.1 | PsycPRwf_0513 | PsycPRwf_1890 | Hypothetical protein. | Hypothetical protein. | 0.412 |
ABQ93560.1 | ABQ93248.1 | PsycPRwf_0605 | PsycPRwf_0293 | PFAM: cytochrome c, class I. | Hypothetical protein. | 0.417 |
ABQ93560.1 | ABQ93664.1 | PsycPRwf_0605 | PsycPRwf_0710 | PFAM: cytochrome c, class I. | TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3. | 0.525 |
ABQ93560.1 | ABQ93746.1 | PsycPRwf_0605 | PsycPRwf_0794 | PFAM: cytochrome c, class I. | PFAM: cytochrome c1. | 0.730 |
ABQ93560.1 | ABQ94689.1 | PsycPRwf_0605 | PsycPRwf_1749 | PFAM: cytochrome c, class I. | Uncharacterized protein-like protein. | 0.450 |
ABQ93560.1 | ABQ94829.1 | PsycPRwf_0605 | PsycPRwf_1889 | PFAM: cytochrome c, class I. | PFAM: cytochrome c, class I. | 0.745 |
ABQ93560.1 | ABQ94830.1 | PsycPRwf_0605 | PsycPRwf_1890 | PFAM: cytochrome c, class I. | Hypothetical protein. | 0.591 |
ABQ93588.1 | ABQ94392.1 | PsycPRwf_0633 | PsycPRwf_1447 | Hypothetical protein. | Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family. | 0.445 |
ABQ93588.1 | ABQ94689.1 | PsycPRwf_0633 | PsycPRwf_1749 | Hypothetical protein. | Uncharacterized protein-like protein. | 0.400 |
ABQ93588.1 | ABQ94830.1 | PsycPRwf_0633 | PsycPRwf_1890 | Hypothetical protein. | Hypothetical protein. | 0.643 |
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