STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ95082.1PFAM: uncharacterised conserved protein UCP028101. (472 aa)    
Predicted Functional Partners:
ABQ95083.1
Periplasmic lipoprotein-like protein.
 
  
 0.966
ABQ95084.1
PFAM: protein of unknown function DUF1111.
 
  
 0.934
ABQ95085.1
Imelysin, Metallo peptidase, MEROPS family M75.
 
    0.852
ABQ95081.1
PFAM: protein of unknown function DUF45.
       0.778
ABQ93820.1
ABC-type Fe3+ transport system periplasmic component-like protein.
 
     0.507
ABQ93821.1
PFAM: extracellular solute-binding protein, family 1.
 
     0.448
ABQ94462.1
TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug.
  
     0.429
ABQ93822.1
PFAM: binding-protein-dependent transport systems inner membrane component.
  
    0.421
Your Current Organism:
Psychrobacter sp. PRwf1
NCBI taxonomy Id: 349106
Other names: P. sp. PRwf-1, Psychrobacter sp. PRwf-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.