STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ95164.1PFAM: Allophanate hydrolase subunit 1. (231 aa)    
Predicted Functional Partners:
ABQ95165.1
TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2.
 0.999
ABQ95166.1
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
ABQ94318.1
Gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
   
 
  0.907
gshA
TIGRFAM: glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
  0.900
ABQ95167.1
PFAM: branched-chain amino acid transport system II carrier protein.
 
    0.820
ABQ93358.1
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase.
   
 
  0.812
ABQ94505.1
Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.811
ABQ94585.1
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
    
 0.804
ABQ93359.1
TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
  0.800
ABQ94048.1
PFAM: NAD-glutamate dehydrogenase.
    
  0.800
Your Current Organism:
Psychrobacter sp. PRwf1
NCBI taxonomy Id: 349106
Other names: P. sp. PRwf-1, Psychrobacter sp. PRwf-1
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