STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0052PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: aeh:Mlg_1601 AMP-dependent synthetase and ligase. (903 aa)    
Predicted Functional Partners:
Hhal_0198
PFAM: Ankyrin; KEGG: aeh:Mlg_2666 ankyrin.
  
 0.988
Hhal_1844
PFAM: Ankyrin; KEGG: rno:294988 ankyrin repeat domain 50 (predicted).
   
 0.987
Hhal_2209
PFAM: AMP-dependent synthetase and ligase; KEGG: aeh:Mlg_2490 AMP-dependent synthetase and ligase.
 
0.986
Hhal_1234
[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: ppr:PBPRA1194 putative malonyl Coa-acyl carrier protein transacylase.
 
 0.984
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.981
Hhal_1664
PFAM: alpha/beta hydrolase fold; KEGG: aeh:Mlg_1493 alpha/beta hydrolase fold.
 
 0.959
rplX
LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
   
 
 0.953
Hhal_1932
PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: tbd:Tbd_1282 rhodanese-like protein.
  
 
 0.922
Hhal_0003
3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: beta-ketoacyl synthase; KEGG: noc:Noc_1663 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.910
Hhal_0018
3-oxoacyl-[acyl-carrier-protein] synthase I; PFAM: beta-ketoacyl synthase; KEGG: aeh:Mlg_1373 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.907
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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