STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0082PFAM: Na+/Pi-cotransporter; KEGG: aeh:Mlg_1739 Na+/Pi-cotransporter. (400 aa)    
Predicted Functional Partners:
Hhal_0081
PFAM: PhoU family protein; KEGG: aeh:Mlg_1738 phosphate uptake regulator, PhoU.
  
    0.729
Hhal_0461
PFAM: Na+/Pi-cotransporter; KEGG: hne:HNE_1902 Na/Pi cotransporter family protein.
  
     0.596
Hhal_0051
KEGG: mmu:230696 expressed sequence AU022252.
  
     0.539
Hhal_1318
PFAM: Na+/Pi-cotransporter; KEGG: pae:PA4822 hypothetical protein.
  
     0.528
Hhal_0080
Hypothetical protein.
       0.480
Hhal_0083
PFAM: protein of unknown function DUF107; KEGG: ade:Adeh_0880 protein of unknown function DUF107.
       0.478
Hhal_1311
SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: aeh:Mlg_0507 hypothetical protein.
  
     0.475
Hhal_0762
KEGG: xla:444281 MGC80916 protein.
  
     0.469
Hhal_0084
KEGG: aeh:Mlg_1027 hypothetical protein.
 
     0.444
Hhal_1282
PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: aeh:Mlg_0507 hypothetical protein.
  
     0.416
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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