Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_0197PFAM: Bile acid:sodium symporter; KEGG: gsu:GSU1411 sodium/bile acid symporter family protein. (362 aa)    
Predicted Functional Partners:
Hhal_0196
KEGG: aeh:Mlg_0233 hypothetical protein.
       0.588
Hhal_0091
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: aeh:Mlg_2712 protein tyrosine phosphatase.
 
  
 0.545
Hhal_0820
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: lca:LSEI_2761 protein-tyrosine-phosphatase.
 
  
 0.539
Hhal_0075
Transcriptional regulator, ArsR family; PFAM: Rhodanese domain protein; regulatory protein, ArsR; KEGG: aeh:Mlg_0623 transcriptional regulator, ArsR family.
 
  
 0.483
Hhal_0646
Transcriptional regulator, ArsR family; PFAM: Rhodanese domain protein; regulatory protein, ArsR; KEGG: aeh:Mlg_0623 transcriptional regulator, ArsR family.
 
  
 0.475
Hhal_2193
Arsenite efflux ATP-binding protein ArsA; KEGG: aeh:Mlg_0312 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; TC 3.A.4.1.1.
     
 0.428
Hhal_1243
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: aeh:Mlg_1431 protein tyrosine phosphatase.
  
  
 0.411
Hhal_1574
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: aeh:Mlg_0127 protein of unknown function DUF201.
  
  
 0.411
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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