STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0235PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bms:BRA0738 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative. (286 aa)    
Predicted Functional Partners:
Hhal_0233
KEGG: hch:HCH_01361 ABC-type proline/glycine betaine transport system, ATPase component; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase.
 0.999
Hhal_0234
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0739 glycine betaine/L-proline ABC transporter, permease protein, putative.
 
 0.999
Hhal_0379
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein.
     
  0.540
Hhal_0679
PFAM: permease YjgP/YjgQ family protein; KEGG: aeh:Mlg_0560 permease YjgP/YjgQ family protein.
     
  0.540
Hhal_0680
PFAM: permease YjgP/YjgQ family protein; KEGG: aeh:Mlg_0559 permease YjgP/YjgQ family protein.
     
  0.540
Hhal_0236
KEGG: tcx:Tcr_1910 hypothetical protein.
       0.529
Hhal_0201
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE1196 putative ABC transporter, permease protein, cysTW family.
  
     0.495
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.462
Hhal_0809
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aeh:Mlg_1100 ABC transporter related; Belongs to the ABC transporter superfamily.
    
 0.462
Hhal_1839
PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN0098 ABC transporter, permease protein.
     
 0.429
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.