Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_0259TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aeh:Mlg_1209 efflux transporter, RND family, MFP subunit. (412 aa)    
Predicted Functional Partners:
Hhal_1990
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: aeh:Mlg_0943 type I secretion outer membrane protein, TolC family.
  
 0.972
Hhal_0258
PFAM: acriflavin resistance protein; KEGG: aeh:Mlg_1210 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.960
Hhal_1875
PFAM: outer membrane efflux protein; KEGG: aeh:Mlg_0651 outer membrane efflux protein.
 
 0.919
Hhal_1917
PFAM: protein of unknown function DUF214; KEGG: aeh:Mlg_1574 protein of unknown function DUF214.
  
  
 0.908
Hhal_0257
PFAM: molybdopterin binding domain; KEGG: aeh:Mlg_1211 molybdopterin binding domain.
       0.773
Hhal_0759
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_2355 ABC transporter related.
  
 
 0.743
Hhal_1562
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_0122 ABC transporter related.
  
 
 0.743
Hhal_1877
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aeh:Mlg_0653 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.725
Hhal_1988
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE2037 putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.705
Hhal_2293
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dde:Dde_0671 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.702
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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