STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0307PFAM: protein of unknown function DUF403; KEGG: aeh:Mlg_0774 protein of unknown function DUF403. (310 aa)    
Predicted Functional Partners:
Hhal_0308
PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: aeh:Mlg_0775 protein of unknown function DUF404.
  
 0.997
Hhal_0306
KEGG: bxe:Bxe_B0724 hypothetical protein.
 
     0.883
Hhal_0305
PFAM: 20S proteasome, A and B subunits; KEGG: mca:MCA2055 hypothetical protein.
 
    0.801
Hhal_0309
Arsenite efflux membrane protein ArsB; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
       0.594
Hhal_0374
KEGG: aeh:Mlg_1914 hypothetical protein.
 
     0.431
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.