STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0493PFAM: flagellar hook-length control protein; KEGG: aeh:Mlg_0714 flagellar hook-length control protein. (460 aa)    
Predicted Functional Partners:
Hhal_0512
KEGG: aeh:Mlg_0901 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
 
  
 0.998
Hhal_0496
PFAM: flagellar assembly protein FliH; KEGG: aeh:Mlg_0711 flagellar assembly protein FliH.
 
  
 0.991
Hhal_0516
TIGRFAM: flagellar basal-body rod protein FlgF; KEGG: aeh:Mlg_0897 flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
  
  
 0.986
Hhal_0518
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.983
Hhal_0487
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.982
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.981
Hhal_0485
PFAM: flagellar biosynthesis protein, FliO; KEGG: aeh:Mlg_0977 flagellar biosynthesis protein, FliO.
 
  
 0.980
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: aeh:Mlg_0708 flagellar hook-basal body complex subunit FliE.
 
  
 0.980
Hhal_0511
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aeh:Mlg_0902 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
  
 0.979
Hhal_0498
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.976
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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