Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_0643PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: eba:ebA381 probable chromosome partitioning related protein. (273 aa)    
Predicted Functional Partners:
Hhal_0642
KEGG: rme:Rmet_2292 hypothetical protein.
  
 
 0.844
Hhal_2438
Chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: aeh:Mlg_2877 ParB-like partition proteins; Belongs to the ParB family.
 
 
 0.839
Hhal_0641
Hypothetical protein.
  
 
 0.764
Hhal_2164
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: ace:Acel_2155 cobyrinic acid a,c-diamide synthase.
  
     0.750
Hhal_1912
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: aeh:Mlg_1464 cobyrinic acid a,c-diamide synthase.
  
     0.544
Hhal_0640
KEGG: plu:plu1034 hypothetical protein.
       0.512
Hhal_0638
Phage DNA replication protein (predicted replicative helicase loader); PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: plu:plu3472 hypothetical protein.
       0.481
Hhal_0639
Hypothetical protein; KEGG: lpn:lpg1005 LvrA.
       0.481
Hhal_0066
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rpa:RPA4721 possible+E2677 pyruvate-flavodoxin oxidoreductase.
     
 0.401
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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