STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0705PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: psb:Psyr_3703 flavodoxin/nitric oxide synthase; Belongs to the WrbA family. (220 aa)    
Predicted Functional Partners:
Hhal_0608
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: stm:STM1119 trp-repressor binding protein.
  
  
 
0.910
ubiE
Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
Hhal_0706
KEGG: aeh:Mlg_0519 putative transmembrane protein.
       0.832
acyP
PFAM: acylphosphatase; KEGG: csa:Csal_1839 acylphosphatase.
       0.675
Hhal_0704
tRNA-processing RNAse BN; TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: aeh:Mlg_0521 putative ribonuclease BN.
       0.659
Hhal_1693
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: aeh:Mlg_1221 putative serine protein kinase, PrkA.
   
    0.568
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.