STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0712KEGG: aeh:Mlg_0514 hypothetical protein. (255 aa)    
Predicted Functional Partners:
Hhal_1807
KEGG: aeh:Mlg_1232 putative membrane protein; K07288 uncharacterized membrane protein.
  
 
 
 0.740
Hhal_2368
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: aeh:Mlg_2387 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
 
 
 0.714
Hhal_1396
DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; KEGG: aeh:Mlg_1712 cell divisionFtsK/SpoIIIE.
   
 
 0.660
Hhal_1184
TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: aeh:Mlg_2541 YecA family protein; Belongs to the UPF0149 family.
  
    0.554
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.502
Hhal_0709
KEGG: aeh:Mlg_0517 hypothetical protein.
 
     0.491
Hhal_2388
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.486
Hhal_0385
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pau:PA14_39650 putative TonB-dependent receptor.
    
 
 0.468
Hhal_0389
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: wsu:WS1416 HugA.
    
 
 0.468
Hhal_1928
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: aeh:Mlg_2276 TonB-dependent receptor.
    
 
 0.468
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.