STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0762KEGG: xla:444281 MGC80916 protein. (306 aa)    
Predicted Functional Partners:
Hhal_0051
KEGG: mmu:230696 expressed sequence AU022252.
  
     0.638
Hhal_0763
PFAM: glycosyl transferase, family 2; KEGG: cgb:cg0424 putative glycosyltransferase.
       0.584
Hhal_2268
PFAM: heat shock protein DnaJ domain protein; KEGG: aeh:Mlg_2497 heat shock protein DnaJ domain protein.
  
     0.556
Hhal_0906
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
     0.475
Hhal_0082
PFAM: Na+/Pi-cotransporter; KEGG: aeh:Mlg_1739 Na+/Pi-cotransporter.
  
     0.469
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
     0.432
Hhal_0760
PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: mba:Mbar_A0022 UDP-N-acetylglucosamine enolpyruvyl transferase.
       0.424
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.424
Hhal_1971
PFAM: glutaredoxin; KEGG: aeh:Mlg_0529 glutaredoxin.
  
     0.407
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.