Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_0773PFAM: Nucleotidyl transferase; KEGG: nph:NP1952A sugar metabolism cluster protein (sugar nucleotidyltransferase homolog). (249 aa)    
Predicted Functional Partners:
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
    0.908
Hhal_0772
Peptidase C26; PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: pfo:Pfl_5513 glutamine amidotransferase class-I.
 
     0.862
Hhal_0771
KEGG: nph:NP1948A hypothetical protein.
 
   
0.820
Hhal_0774
Hypothetical protein.
 
   
 0.743
Hhal_0511
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aeh:Mlg_0902 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
    0.692
Hhal_0775
KEGG: rfr:Rfer_1254 hypothetical protein.
       0.671
Hhal_0776
Hypothetical protein.
       0.671
Hhal_0777
PFAM: glycosyl transferase, group 1; KEGG: mgm:Mmc1_0171 glycosyl transferase, group 1.
       0.671
Hhal_0510
TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: aeh:Mlg_0903 flagellar hook-associated protein 3.
  
    0.657
Hhal_1598
KEGG: aeh:Mlg_2041 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase, subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase, type 3.
 
  
 0.516
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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