STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0782PFAM: glycosyl transferase, family 2; KEGG: bha:BH3714 exopolysaccharide biosynthesis. (274 aa)    
Predicted Functional Partners:
Hhal_1566
PFAM: glycosyl transferase, family 2; KEGG: aeh:Mlg_0132 glycosyl transferase, family 2.
 
 
 0.785
Hhal_0798
PFAM: glycosyl transferase, family 2; KEGG: cps:CPS_3254 glycosyl transferase, group 2 family protein.
 
 
 0.776
Hhal_0763
PFAM: glycosyl transferase, family 2; KEGG: cgb:cg0424 putative glycosyltransferase.
  
     0.765
Hhal_0173
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); KEGG: bja:bll7580 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
  
 0.686
Hhal_0206
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mba:Mbar_A0011 hypothetical protein.
  
 
 0.664
Hhal_1828
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tbd:Tbd_1110 conserved hypothetical protein containing TPR repeat.
  
 
 0.664
Hhal_0142
Hypothetical protein; KEGG: ade:Adeh_2705 response regulator receiver.
  
 
 0.653
Hhal_1535
PFAM: sugar transferase; KEGG: aeh:Mlg_0159 undecaprenyl-phosphate galactose phosphotransferase.
   
 0.647
Hhal_0366
KEGG: mgm:Mmc1_3409 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.573
Hhal_0780
PFAM: glycosyl transferase, group 1; KEGG: bth:BT1344 putative glycosyltransferase.
 
   
 0.556
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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