STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0809PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aeh:Mlg_1100 ABC transporter related; Belongs to the ABC transporter superfamily. (375 aa)    
Predicted Functional Partners:
Hhal_1189
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_2575 binding-protein-dependent transport systems inner membrane component.
 
 0.983
Hhal_1188
PFAM: extracellular solute-binding protein, family 1; KEGG: aeh:Mlg_2574 extracellular solute-binding protein, family 1.
 
 
 0.982
Hhal_0185
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.918
Hhal_0810
Hypothetical protein; KEGG: sde:Sde_1422 ThiS, thiamine-biosynthesis.
       0.570
wecA
Glycosyl transferase, family 4; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55). Belongs to the glycosyltransferase 4 family. WecA subfamily.
       0.497
Hhal_0235
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bms:BRA0738 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative.
   
 0.444
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
   
0.437
nadE
DNA-directed RNA polymerase, subunit H; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
      
 0.426
Hhal_0597
PFAM: extracellular solute-binding protein, family 5; KEGG: aeh:Mlg_2274 extracellular solute-binding protein, family 5.
   
 
 0.422
Hhal_2125
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_2229 ABC transporter related.
  
  
 
0.402
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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