STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (371 aa)    
Predicted Functional Partners:
Hhal_1621
Protoporphyrin IX magnesium-chelatase; PFAM: von Willebrand factor, type A; KEGG: rru:Rru_A0486 von Willebrand factor, type A.
  
 
 0.956
Hhal_0881
PFAM: conserved hypothetical protein 701; KEGG: aeh:Mlg_0431 conserved hypothetical protein 701.
 
  
 0.941
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.941
Hhal_1635
Cobaltochelatase CobN subunit; KEGG: rpd:RPD_3734 magnesium-chelatase, subunit H; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase.
   
 
 0.930
Hhal_0882
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.929
Hhal_1622
Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
   
 
 0.912
Hhal_1552
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_A3789 hypothetical protein.
  
  
 0.819
Hhal_0818
KEGG: aeh:Mlg_0738 hypothetical protein.
       0.775
Hhal_0066
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rpa:RPA4721 possible+E2677 pyruvate-flavodoxin oxidoreductase.
      
 0.744
Hhal_0816
Multisubunit sodium/proton antiporter, MrpG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: aeh:Mlg_0740 Na+/H+ antiporter subunit; TC 2.A.63.1.
       0.740
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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