STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0910PFAM: heat shock protein DnaJ domain protein; KEGG: aeh:Mlg_2252 heat shock protein DnaJ domain protein. (268 aa)    
Predicted Functional Partners:
Hhal_0280
PFAM: NifQ family protein; KEGG: dar:Daro_1448 NifQ.
  
 
 0.987
Hhal_0145
PFAM: Heat shock protein 70; KEGG: sus:Acid_6320 heat shock protein 70.
  
 
 0.743
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.743
Hhal_1997
Plasmid segregation actin-type ATPase ParM; KEGG: sth:STH3287 hypothetical protein.
  
 
 0.732
Hhal_1018
PFAM: Nucleotidyl transferase; KEGG: aeh:Mlg_0197 nucleotidyl transferase.
 
    0.698
erpA
Iron-sulfur cluster assembly accessory protein; Required for insertion of 4Fe-4S clusters for at least IspG.
  
 
 0.682
Hhal_1793
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aeh:Mlg_1247 iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.682
Hhal_1019
PFAM: aminoglycoside phosphotransferase; KEGG: aeh:Mlg_0198 aminoglycoside phosphotransferase.
      0.580
Hhal_0909
PFAM: Appr-1-p processing domain protein; KEGG: aeh:Mlg_0422 Appr-1-p processing domain protein.
  
    0.576
purC
KEGG: aeh:Mlg_2257 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase.
       0.571
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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