STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_0953Hypothetical protein. (148 aa)    
Predicted Functional Partners:
zapE
AFG1-family ATPase; Reduces the stability of FtsZ polymers in the presence of ATP.
       0.768
Hhal_0951
PFAM: Spermine synthase; Methyltransferase type 12; KEGG: aeh:Mlg_0336 spermine synthase.
       0.762
Hhal_0952
PFAM: histone deacetylase superfamily; KEGG: aeh:Mlg_0335 histone deacetylase superfamily.
       0.762
Hhal_0955
PFAM: type IV pilus assembly PilZ.
       0.713
Hhal_0956
KEGG: aeh:Mlg_0329 hypothetical protein.
       0.713
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.552
Hhal_0950
TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: aeh:Mlg_0337 methionine biosynthesis protein MetW.
       0.552
Hhal_0948
PFAM: protein of unknown function DUF167; KEGG: aha:AHA_3661 hypothetical protein; Belongs to the UPF0235 family.
       0.423
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.