Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_0964KEGG: aeh:Mlg_2437 competence protein F. (238 aa)    
Predicted Functional Partners:
Hhal_2324
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: aeh:Mlg_2630 DNA protecting protein DprA.
 
 
 0.918
Hhal_2404
KEGG: aeh:Mlg_0082 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
  
 0.901
Hhal_1249
PFAM: ComEC/Rec2-related protein; KEGG: aeh:Mlg_1437 ComEC/Rec2-related protein.
 
  
 0.844
Hhal_1314
PFAM: beta-lactamase domain protein; KEGG: lmo:lmo0945 hypothetical protein.
 
  
 0.767
Hhal_0566
PFAM: Prephenate dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: aeh:Mlg_0928 prephenate dehydrogenase.
   
    0.731
Hhal_0961
Carboxylesterase BioH (pimeloyl-CoA synthesis); PFAM: alpha/beta hydrolase fold; KEGG: aeh:Mlg_2434 alpha/beta hydrolase fold.
 
   
 0.730
Hhal_2103
PFAM: protein of unknown function UPF0102; KEGG: aeh:Mlg_2205 protein of unknown function UPF0102; Belongs to the UPF0102 family.
 
    0.699
Hhal_1552
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_A3789 hypothetical protein.
  
    0.692
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
     
 0.680
bioC
Biotin biosynthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
     
 0.672
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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