Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_0979PFAM: FAD linked oxidase domain protein; KEGG: aeh:Mlg_0307 FAD linked oxidase domain protein. (491 aa)    
Predicted Functional Partners:
Hhal_0978
Cardiolipin synthetase 2; PFAM: phospholipase D/Transphosphatidylase; KEGG: aeh:Mlg_0308 phospholipase D/transphosphatidylase.
   
   0.782
Hhal_0222
PFAM: FAD linked oxidase domain protein; KEGG: aeh:Mlg_1895 FAD linked oxidase domain protein.
     0.780
Hhal_0980
PFAM: VacJ family lipoprotein; KEGG: aeh:Mlg_0305 VacJ family lipoprotein.
       0.773
fur
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: aeh:Mlg_0310 ferric uptake regulator, Fur family; Belongs to the Fur family.
 
     0.660
Hhal_1494
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: csa:Csal_1614 electron transfer flavoprotein, alpha subunit.
 
 
 0.615
Hhal_0223
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: aeh:Mlg_1896 protein of unknown function DUF224, cysteine-rich region domain protein.
  
 0.605
Hhal_1495
PFAM: electron transfer flavoprotein beta-subunit; KEGG: mag:amb3904 electron transfer flavoprotein, beta subunit.
 
 
 0.554
Hhal_0981
Hypothetical protein.
       0.545
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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