STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1189PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_2575 binding-protein-dependent transport systems inner membrane component. (549 aa)    
Predicted Functional Partners:
Hhal_1188
PFAM: extracellular solute-binding protein, family 1; KEGG: aeh:Mlg_2574 extracellular solute-binding protein, family 1.
 
 
 0.998
Hhal_0809
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aeh:Mlg_1100 ABC transporter related; Belongs to the ABC transporter superfamily.
 0.996
Hhal_1185
Aminopeptidase P, Metallo peptidase, MEROPS family M24B; PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: aeh:Mlg_2542 peptidase M24.
     
 0.654
Hhal_1184
TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: aeh:Mlg_2541 YecA family protein; Belongs to the UPF0149 family.
     
 0.653
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
       0.650
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.570
Hhal_1186
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: aeh:Mlg_2543 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family.
       0.561
Hhal_1187
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: aeh:Mlg_2544 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family.
       0.561
Hhal_1182
Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
     
 0.512
Hhal_1183
KEGG: aeh:Mlg_2540 hypothetical protein.
       0.500
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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