Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Hhal_0322 | Hhal_1305 | Hhal_0322 | Hhal_1305 | PFAM: phage integrase family protein; KEGG: sit:TM1040_3585 phage integrase; Belongs to the 'phage' integrase family. | PFAM: protein of unknown function DUF159; KEGG: aeh:Mlg_2142 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. | 0.584 |
| Hhal_0322 | xerC-2 | Hhal_0322 | Hhal_1659 | PFAM: phage integrase family protein; KEGG: sit:TM1040_3585 phage integrase; Belongs to the 'phage' integrase family. | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.498 |
| Hhal_1304 | Hhal_1305 | Hhal_1304 | Hhal_1305 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aeh:Mlg_1521 diguanylate cyclase. | PFAM: protein of unknown function DUF159; KEGG: aeh:Mlg_2142 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. | 0.420 |
| Hhal_1305 | Hhal_0322 | Hhal_1305 | Hhal_0322 | PFAM: protein of unknown function DUF159; KEGG: aeh:Mlg_2142 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. | PFAM: phage integrase family protein; KEGG: sit:TM1040_3585 phage integrase; Belongs to the 'phage' integrase family. | 0.584 |
| Hhal_1305 | Hhal_1304 | Hhal_1305 | Hhal_1304 | PFAM: protein of unknown function DUF159; KEGG: aeh:Mlg_2142 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aeh:Mlg_1521 diguanylate cyclase. | 0.420 |
| Hhal_1305 | xerC-2 | Hhal_1305 | Hhal_1659 | PFAM: protein of unknown function DUF159; KEGG: aeh:Mlg_2142 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.575 |
| xerC-2 | Hhal_0322 | Hhal_1659 | Hhal_0322 | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | PFAM: phage integrase family protein; KEGG: sit:TM1040_3585 phage integrase; Belongs to the 'phage' integrase family. | 0.498 |
| xerC-2 | Hhal_1305 | Hhal_1659 | Hhal_1305 | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | PFAM: protein of unknown function DUF159; KEGG: aeh:Mlg_2142 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. | 0.575 |