STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1353PFAM: transport system permease protein; KEGG: mac:MA1847 iron(III) ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (363 aa)    
Predicted Functional Partners:
Hhal_1352
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbu:Mbur_1095 ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit.
 
 0.993
Hhal_1354
PFAM: periplasmic binding protein; KEGG: tko:TK2018 ABC-type iron(III)-siderophore transport system, periplasmic component.
 
 
 0.992
Hhal_1921
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abo:ABO_2368 probable ATP-binding ABC transporter protein.
 
 0.983
Hhal_1923
PFAM: periplasmic binding protein; KEGG: abo:ABO_2370 Fe3+-hydroxamate ABC transporter periplasmic binding protein.
 
 
 0.967
Hhal_1348
KEGG: mca:MCA2296 precorrin-6Y C5,15-methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
  
 0.825
cysG1
uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.810
Hhal_1351
KEGG: mgm:Mmc1_3136 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Belongs to the precorrin methyltransferase family.
     
 0.789
Hhal_1350
PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mca:MCA2299 CbiX protein.
  
    0.773
Hhal_1347
TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dar:Daro_1688 precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
  
    0.759
Hhal_1344
TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mca:MCA2293 precorrin-3B C17-methyltransferase/conserved domain protein.
       0.757
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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