STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1377PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN3629 hypothetical protein. (152 aa)    
Predicted Functional Partners:
Hhal_1378
TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: aeh:Mlg_0879 uncharacterized domain 1.
  
0.986
Hhal_1376
Oligopeptidase B, Serine peptidase, MEROPS family S09A; PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: aeh:Mlg_1577 oligopeptidase B.
       0.773
Hhal_0052
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: aeh:Mlg_1601 AMP-dependent synthetase and ligase.
  
 
 0.640
Hhal_0441
PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aeh:Mlg_1986 histone family protein nucleoid-structuring protein H-NS.
  
     0.499
plsX
Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.490
Hhal_1489
PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: aeh:Mlg_1986 histone family protein nucleoid-structuring protein H-NS.
  
     0.462
Hhal_1379
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: aeh:Mlg_2113 membrane protein involved in aromatic hydrocarbon degradation.
       0.420
Hhal_2171
PFAM: isochorismatase hydrolase; KEGG: aeh:Mlg_2418 isochorismatase hydrolase.
  
 
 0.412
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.405
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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