STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1420Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: aeh:Mlg_1642 periplasmic sensor signal transduction histidine kinase. (436 aa)    
Predicted Functional Partners:
Hhal_1419
Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: aeh:Mlg_1641 response regulator receiver protein.
 0.998
Hhal_0366
KEGG: mgm:Mmc1_3409 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.831
Hhal_1035
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: aeh:Mlg_0271 dihydrolipoamide dehydrogenase.
    
 0.763
Hhal_0647
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: tdn:Tmden_0219 multi-sensor hybrid histidine kinase.
  
 
 0.633
Hhal_1019
PFAM: aminoglycoside phosphotransferase; KEGG: aeh:Mlg_0198 aminoglycoside phosphotransferase.
 
     0.563
Hhal_1421
PFAM: regulatory protein, ArsR; KEGG: rxy:Rxyl_1608 transcriptional regulator, ArsR family.
       0.558
Hhal_1416
PFAM: protein of unknown function DUF214; KEGG: aeh:Mlg_1312 protein of unknown function DUF214.
   
   0.528
Hhal_1417
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1311 ABC transporter related.
   
   0.528
Hhal_1424
KEGG: aeh:Mlg_2742 hypothetical protein.
 
    0.476
Hhal_1414
PFAM: UspA domain protein; KEGG: aeh:Mlg_1314 UspA domain protein.
  
    0.451
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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