STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1523KEGG: aeh:Mlg_0149 hypothetical protein. (244 aa)    
Predicted Functional Partners:
Hhal_1525
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: aeh:Mlg_0151 UBA/ThiF-type NAD/FAD binding protein.
 
     0.898
Hhal_1521
PFAM: lipopolysaccharide biosynthesis; KEGG: aeh:Mlg_0147 lipopolysaccharide biosynthesis.
 
     0.811
Hhal_1514
TIGRFAM: eight transmembrane protein EpsH; Eight transmembrane protein EpsH; KEGG: aeh:Mlg_0140 eight transmembrane protein EpsH.
 
     0.793
Hhal_1519
KEGG: aeh:Mlg_0145 hypothetical protein.
 
     0.782
Hhal_1515
KEGG: aeh:Mlg_0141 glycosyl transferase, group 1.
 
     0.778
Hhal_1516
KEGG: aeh:Mlg_0142 hypothetical protein.
 
     0.773
Hhal_1507
PFAM: lipopolysaccharide biosynthesis; KEGG: aeh:Mlg_0147 lipopolysaccharide biosynthesis.
  
     0.756
Hhal_1558
PFAM: O-antigen polymerase; KEGG: aeh:Mlg_0119 O-antigen polymerase.
  
     0.753
Hhal_1502
PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: aeh:Mlg_0097 peptidase S1 and S6, chymotrypsin/Hap.
  
     0.743
Hhal_1534
Multi-sensor signal transduction histidine kinase; TIGRFAM: histidine kinase; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; KEGG: aeh:Mlg_0158 periplasmic sensor signal transduction histidine kinase.
  
   
 0.743
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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