STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1566PFAM: glycosyl transferase, family 2; KEGG: aeh:Mlg_0132 glycosyl transferase, family 2. (333 aa)    
Predicted Functional Partners:
Hhal_1567
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: noc:Noc_1960 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.824
Hhal_0782
PFAM: glycosyl transferase, family 2; KEGG: bha:BH3714 exopolysaccharide biosynthesis.
 
 
 0.786
Hhal_1568
KEGG: noc:Noc_1961 hypothetical protein.
     
 0.779
Hhal_0763
PFAM: glycosyl transferase, family 2; KEGG: cgb:cg0424 putative glycosyltransferase.
 
 
 0.723
Hhal_1571
KEGG: aeh:Mlg_0132 glycosyl transferase, family 2.
 
 
   0.708
Hhal_1557
PFAM: polysaccharide deacetylase; KEGG: aeh:Mlg_0110 polysaccharide deacetylase.
  
 0.703
Hhal_1535
PFAM: sugar transferase; KEGG: aeh:Mlg_0159 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.617
Hhal_1536
PFAM: polysaccharide export protein; KEGG: aeh:Mlg_0160 polysaccharide export protein.
 
  
 0.574
Hhal_1509
PFAM: glycosyl transferase, group 1; KEGG: aeh:Mlg_0136 glycosyl transferase, group 1.
 
  
 0.547
Hhal_1538
KEGG: aeh:Mlg_0100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
 
  
 0.537
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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