STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1621Protoporphyrin IX magnesium-chelatase; PFAM: von Willebrand factor, type A; KEGG: rru:Rru_A0486 von Willebrand factor, type A. (625 aa)    
Predicted Functional Partners:
Hhal_1622
Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
0.998
Hhal_1635
Cobaltochelatase CobN subunit; KEGG: rpd:RPD_3734 magnesium-chelatase, subunit H; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase.
 
 0.996
Hhal_1633
TIGRFAM: magnesium protoporphyrin O-methyltransferase; PFAM: Magnesium-protoporphyrin IX methyltransferase domain protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_A0619 magnesium protoporphyrin O-methyltransferase.
 
 0.988
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.956
Hhal_1600
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rpd:RPD_3747 bacteriochlorophyll/chlorophyll synthetase.
 
  
 0.919
Hhal_0881
PFAM: conserved hypothetical protein 701; KEGG: aeh:Mlg_0431 conserved hypothetical protein 701.
  
 
 0.911
Hhal_1602
TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; KEGG: rpc:RPC_1304 geranylgeranyl reductase.
 
  
 0.901
Hhal_1620
PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rpa:RPA0345 putative protoporphyrin IX magnesium chelatase BchO.
 
  
 0.879
Hhal_1611
TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rru:Rru_A2981 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide.
  
  
 0.872
Hhal_1619
Four-step phytoene desaturase; TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpe:RPE_1315 amine oxidase.
  
  
 0.863
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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