STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1693PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: aeh:Mlg_1221 putative serine protein kinase, PrkA. (648 aa)    
Predicted Functional Partners:
Hhal_1692
PFAM: protein of unknown function DUF444; KEGG: aeh:Mlg_1222 protein of unknown function DUF444; Belongs to the UPF0229 family.
  
 0.999
Hhal_1691
PFAM: SpoVR family protein; KEGG: aeh:Mlg_1223 SpoVR family protein.
 
  
 0.996
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.681
Hhal_1160
Aldo/keto reductases-like diketogulonate reductase; KEGG: sme:SMc01429 putative oxidoreductase protein.
   
    0.670
Hhal_1120
Trehalose 6-phosphate synthase; PFAM: glycosyl transferase, family 20; KEGG: aeh:Mlg_0007 alpha,alpha-trehalose-phosphate synthase (UDP-forming).
   
    0.553
Hhal_0345
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.521
Hhal_2279
Fructosamine kinase; PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: tbd:Tbd_0148 hypothetical protein.
   
    0.520
Hhal_2200
PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: aeh:Mlg_2481 PhoH family protein.
   
  
 0.502
Hhal_1694
PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: aeh:Mlg_1718 pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
       0.452
Hhal_0608
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: stm:STM1119 trp-repressor binding protein.
   
    0.437
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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