STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1703PFAM: Redoxin domain protein; KEGG: csa:Csal_2593 putative thiol:disulfide interchange protein. (273 aa)    
Predicted Functional Partners:
Hhal_2338
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: aeh:Mlg_0022 cytochrome c biogenesis protein, transmembrane region.
  
 
 0.905
Hhal_0823
PFAM: electron transport protein SCO1/SenC; KEGG: lpp:lpp0480 hypothetical protein.
 
 
 0.859
Hhal_1704
ChaC family protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
 
     0.802
Hhal_1701
PFAM: MOSC domain containing protein; KEGG: eba:ebA3087 hypothetical protein.
       0.727
Hhal_1702
KEGG: mgm:Mmc1_3121 conserved hypothetical protein.
       0.727
Hhal_1700
PFAM: carbonic anhydrase; KEGG: mxa:MXAN_0617 putative carbonic anhydrase.
   
   0.700
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.676
Hhal_1369
TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: aeh:Mlg_1687 cytochrome c-type biogenesis protein CcmF.
 
  
 0.619
Hhal_1705
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pau:PA14_07500 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
     
 0.599
Hhal_2289
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aeh:Mlg_0248 thioredoxin reductase.
  
 
 0.583
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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