STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1840PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nmu:Nmul_A1611 ABC transporter related. (263 aa)    
Predicted Functional Partners:
Hhal_1839
PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN0098 ABC transporter, permease protein.
 
 0.998
Hhal_1841
PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN0096 hypothetical protein.
 
 0.997
Hhal_2119
PFAM: protein of unknown function DUF140; KEGG: aeh:Mlg_2222 protein of unknown function DUF140.
 0.988
Hhal_2118
PFAM: Mammalian cell entry related domain protein; KEGG: aeh:Mlg_2221 mammalian cell entry related domain protein.
 
 0.965
Hhal_1842
KEGG: pau:PA14_22650 putative ABC-type uncharacterized transport system.
 
    0.961
Hhal_2120
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_2223 ABC transporter related.
  
  
 
0.912
Hhal_1778
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1983 ABC transporter related.
    
0.902
Hhal_2116
KEGG: aeh:Mlg_2219 anti-sigma-factor antagonist.
  
 0.881
Hhal_2117
PFAM: toluene tolerance family protein; KEGG: aeh:Mlg_2220 toluene tolerance family protein.
  
 
 0.853
Hhal_0185
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.794
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.