STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1958PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: aeh:Mlg_1660 Fe-S oxidoreductase. (517 aa)    
Predicted Functional Partners:
Hhal_1957
PFAM: Nitrate reductase, gamma subunit; KEGG: aeh:Mlg_1659 nitrate reductase, gamma subunit.
 
 
 0.966
Hhal_1956
DsrC family protein; Part of a sulfur-relay system.
 
 
 
 0.946
Hhal_1952
KEGG: aeh:Mlg_1654 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region.
 
 
 0.934
Hhal_1951
KEGG: aeh:Mlg_1653 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
 
 0.931
Hhal_1960
KEGG: aeh:Mlg_1662 hypothetical protein.
 
  
 0.928
Hhal_1959
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; glucose-inhibited division protein A; KEGG: aeh:Mlg_1661 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
   
 0.923
Hhal_1962
PFAM: Polysulphide reductase, NrfD; KEGG: aeh:Mlg_1664 polysulphide reductase, NrfD.
 
   
 0.907
Hhal_1954
PFAM: DsrE family protein; KEGG: aeh:Mlg_1656 DsrE family protein; Belongs to the DsrF/TusC family.
 
   
 0.882
Hhal_1955
PFAM: DsrH family protein; KEGG: aeh:Mlg_1657 DsrH family protein.
 
   
 0.882
Hhal_1953
PFAM: DsrE family protein; KEGG: aeh:Mlg_1655 DsrE family protein.
 
   
 0.862
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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