Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_2118PFAM: Mammalian cell entry related domain protein; KEGG: aeh:Mlg_2221 mammalian cell entry related domain protein. (151 aa)    
Predicted Functional Partners:
Hhal_2117
PFAM: toluene tolerance family protein; KEGG: aeh:Mlg_2220 toluene tolerance family protein.
 
 0.999
Hhal_2119
PFAM: protein of unknown function DUF140; KEGG: aeh:Mlg_2222 protein of unknown function DUF140.
 0.999
Hhal_2120
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_2223 ABC transporter related.
 
 0.999
Hhal_1839
PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN0098 ABC transporter, permease protein.
 
 0.992
Hhal_2116
KEGG: aeh:Mlg_2219 anti-sigma-factor antagonist.
 
 0.992
Hhal_1840
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nmu:Nmul_A1611 ABC transporter related.
 
 0.985
Hhal_1841
PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN0096 hypothetical protein.
     
  0.900
Hhal_0980
PFAM: VacJ family lipoprotein; KEGG: aeh:Mlg_0305 VacJ family lipoprotein.
 
   
 0.898
Hhal_2115
PFAM: BolA family protein; KEGG: cyb:CYB_2713 BolA/YrbA family protein; Belongs to the BolA/IbaG family.
     
 0.684
lptA
OstA family protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
  
    0.682
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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