Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_2164PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: ace:Acel_2155 cobyrinic acid a,c-diamide synthase. (260 aa)    
Predicted Functional Partners:
Hhal_2438
Chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: aeh:Mlg_2877 ParB-like partition proteins; Belongs to the ParB family.
 
 0.935
Hhal_2166
PFAM: CheW domain protein; KEGG: sde:Sde_3106 biotin synthase.
  
   0.790
Hhal_2165
PFAM: chemotaxis sensory transducer; KEGG: rpb:RPB_3522 methyl-accepting chemotaxis sensory transducer.
  
    0.773
Hhal_0643
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: eba:ebA381 probable chromosome partitioning related protein.
  
     0.750
Hhal_2167
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: tcx:Tcr_1612 CheA signal transduction histidine kinase.
  
    0.639
Hhal_0208
Cellulose synthase (UDP-forming); PFAM: glycosyl transferase, family 2; KEGG: plt:Plut_0992 cellulose synthase (UDP-forming).
  
 
 0.578
Hhal_2163
PFAM: chemotaxis sensory transducer; SMART: histidine kinase, HAMP region domain protein; KEGG: vch:VCA1092 methyl-accepting chemotaxis protein.
  
    0.563
Hhal_2168
PFAM: response regulator receiver; KEGG: hch:HCH_00454 FOG: CheY-like receiver.
  
    0.540
Hhal_0641
Hypothetical protein.
  
 
 0.522
Hhal_0642
KEGG: rme:Rmet_2292 hypothetical protein.
  
 
 0.522
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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