Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Hhal_2172PFAM: outer membrane lipoprotein Slp; KEGG: aeh:Mlg_2419 outer membrane lipoprotein Slp. (177 aa)    
Predicted Functional Partners:
Hhal_2173
TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; KEGG: aeh:Mlg_2420 outer membrane lipoprotein Slp.
 
    
0.867
Hhal_2171
PFAM: isochorismatase hydrolase; KEGG: aeh:Mlg_2418 isochorismatase hydrolase.
       0.773
Hhal_2170
PFAM: Hpt domain protein; KEGG: sru:SRU_2427 probable sensor/response hybrid, putative.
       0.675
Hhal_2174
ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: aeh:Mlg_1043 ABC-3 protein.
       0.623
Hhal_2175
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1042 ABC transporter related.
       0.623
smg
PFAM: protein of unknown function DUF494; KEGG: aeh:Mlg_2631 protein of unknown function DUF494; Belongs to the Smg family.
  
     0.478
Hhal_2176
PFAM: periplasmic solute binding protein; KEGG: aeh:Mlg_1041 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.476
Hhal_2169
Hypothetical protein.
       0.449
Hhal_1931
PFAM: protein of unknown function DUF1043; KEGG: aeh:Mlg_0881 protein of unknown function DUF1043.
  
     0.421
Hhal_1800
PFAM: Sporulation domain protein; KEGG: aeh:Mlg_1240 sporulation domain protein.
  
     0.416
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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